Web Resources for CS3650
(Computer Systems)
Final exam: Apr. 27:
The final exam will be on Friday, Apr. 27 from 8 a.m. - 10 a.m.
in 201 Mugar Life Science Bldg.
It will be open book, open notes.
NOTE for Spring, 2018:
This web page is for the section of Prof. Cooperman,
and not for the section of
Prof. Tuck.
Please note that the two version of this course may be similar,
but are not tightly coupled.
NOTE:
The office hours are as stated on the syllabus
(11:30 - 12:30, after class, on Tuesdays and Fridays for Spring, 2018),
and by appointment.
In addition,
upper class tutoring is available.
The schdule is posted there for wak-in or one-on-one tutoring.
When you discover which tutors (i.e., for which days) specialize in
Computer Systems, please pass that information to me, and I will post
that information here.
See below for:
Course basics:
Here are some immediate resources in the course for doing homework, following
the readings, etc.
- The homework subdirectory
of the course directory contains all course homework,
and the course directory contains all
handouts, and the syllabus.
The syllabus contains the required
readings in the textbook. The course directory is also available
from our Linux machines as /course/cs3650/.
-
The course directory includes a help directory.
There are two older reviews of UNIX there. But please consider
this
excellent modern introduction to UNIX by M. Stonebank.
-
Please also note the directory for
UNIX (Linux) editors.
You will need to login to a Linux machine to use these.
They are in /course/cs3650/unix-editors. For example,
to learn vi (estimated time: one hour), login to Linux and do:
vi /course/cs3650/editors-unix/vitutor.vi
and follow the on-screen instructions.
-
Appendix A is also online
(requires CCIS Linux password).
It is the manual for
MIPS Assembly language. Read it, and re-read it.
- Portions of the rest of
an older edition of the text CD
are also available online (requires CCIS password).
-
Some help files for Linux and its compilers,
editors, etc. are also available.
As you use Linux, please look into using gdb
(GNU debugger), which will help you greatly in debugging. This will
help when you test your homeworks on our Linux machines.
-
There is also a good, free
on-line C book by Mike Banahan, Declan Brady and Mark Doran.
-
If you use Windows, there is a free, open-source IDE (Integrated
Development Environment) for C/C++,
Dev-C++.
Homeworks must be handed in using C, but this is a subset of C++.
When your code works, you must still test it under Linux:
gcc myfile.c; ./a.out
If it doesn't work on our Linux system, it will be graded
as not working.
-
Additional help available: Upper Class Tutoring (but please do also come to my office hours)
Going beyond: enrichment material:
- Some students have asked about a book for a more advanced introduction
to Linux and systems programming. This book goes well beyond what is
needed for the course. But for those who are interested, there is:
Advanced UNIX Programming, by Marc J. Rochkind
- If you're interested in reading the original UNIX research paper, which
announced the implementation of UNIX to the world, see
The UNIX Time-Sharing System (1974).
-
Lecture on Parallel Computing (read the first half only, for
a nice overview and graphs of why multi-core is necessary, and
the benefits of many-core)
Texts for second half of course:
- Online text: ostep.org
(The final will cover all of the chapters on concurrency;
and also the chapters on files
from "Files and Directories" through "Fast File System (FFS)":
superblock, inode, etc. --- you do not
need to read about I/O Devices, disk drives and disk arrays.)
-
xv6-rev8.pdf:
UNIX xv6 (hyperlinked):
OR MAYBE:
UNIX xv6 (hyperlinked): (systems team re-organizing
our web directories?)
xv6 source code for UNIX kernel: especially see:
proc.c,h (process table);
swtch.S (context switch to a new process);
spinlock.c,h (spinlock, like a mutex);
file.c,h (file descriptor pointing to an open file);
fs.c,h (filesystem using superblock, inode, etc.);
pipe.c,h (pipes: e.g., ls | wc );
bio.c,h (buffered I/O: linked list of buffers acting as a cache
for disk blocks or disk sectors).
If you are curious, you can also read about the
history of xv6.
-
Book with commentary on xv6-rev8 (UNIX kernel)
- Python (based on materials in
/course/cs3650/python)
-
Early history of Python (just for fun)
MIPS Simulator for Assembly Language homework (MARS):
- There is a
MIPS Assembly language simulator with
free downloads available and
online documentation. For your convenience, a copy of
the simulator is at: MIPS-simulator.
- To begin running the simulator, go inside the folder, and
double-click on the Mars.jar icon. Alternatively, if running
from the command line in Linux, type:
java -jar Mars.jar
If you download Mars.jar for your computer, there are also
suggestions on that page for running Mars.
- The syntax of the assembly language is intended to be compatible
with Appendix B of our textbook (also
available online
(requires CCIS password).
- The software is distributed as a Java .jar file. It requires
Java J2SE 1.5 or later. Depending on your configuration,
you may be able to directly open it from the download menu.
If you have trouble, or if you prefer to run from the
command line on your own computer, the Java SDK is is also available
for free download from the same download page. The instructions
for running it from Windows or DOS should work equally well
on Linux. The CCIS machines should already have
the necessary Java SDK installed.
- GOTCHAS: There are several important things to watch out for.
- When you hit the "Assemble" menu item, any error messages about
failure to assemble are in the
bottom window pane, tab: "Mars Messages".
Input/Output is in the bottom window pane, tab: "Run I/O"
- If you paste assembly code into the edit window pane, you must
save that code to a file before Mars will let you assemble it.
- If you have selected a box with your mouse (e.g. "Value" box in
the data window pane, or "Register" box), then Mars will not
update the value in that box. Mars assumes you prefer to write
your own value into that box, and not to allow the assembly
program to use that box.
- If your program stops at an error, read the "Mars Messages" for
the cause of the error, and then hit the "Backstep" menu item
to see what caused that error. Continue hitting "Backstep"
or "Singlestep" in order to identify the error.
- Your main routine must call the "exit" system call to terminate.
It may not simply call return ("jr $ra"). Note that page B-44
of Appendix B of the text (fourth edition) has a table of
"system services" (system calls). These allow you to do "exit"
and also I/O.
- One of the nicer features of this software is a limited
backstep capability (opposite of single-step) for debugging.
In addition, the help menu includes a short summary
of the MIPS assembly instructions.
In general, I like this IDE for assembly even better than some
of the IDEs that I have seen for C/C++/Java.
(The one feature that I found
a little unintuitive is that if you want to look at the
stack (for example) instead of data, you must go to the
Data Segment window pane, and use the drop-down menu at the
bottom of that pane to choose "current $sp" instead of ".data".)
- Please note the
three sample assembly programs, along with an accompanying
tutorial on the same web page.
- I'd appreciate if if you could be on the lookout
for any unusual issues, and report them promptly (along with
possible workarounds), so the rest of the class can benefit.
Thanks very much for your help on this.
Two security bugs, recently discovered, that
affect most CPUs (technical paper released on Jan. 3, 2018):
-
Meltdown paper
(potentially affects CPUs implementing out-of-order executation,
a feature that has been present on many CPUs since 1995)
-
Spectre paper
(potentially read the data in the address space of a different
user process)
NEWS (from Spring, 2016
and earlier):
New memory technology: 3D XPoint
(Intel/Micron, from press release)
(non-volatile memory (like Flash/SSD), but 1,000 times faster and
byte-addressable; at a price between Flash and RAM ??;
available now in small quantities for special applications)
Details:
OLDER NEWS from Spring, 2015:
NEWS:
Talk by Yale Patt (famous researcher
in Computer Architecture)
NEWS:
2015 CCIS Colloquia (research talks by invited guests to CCIS: topics including security, big data, social networks, robotics, natural language, etc.)
NEWS:
Android Apps that Never Die (talk by me, Gene Cooperman, and Rohan Garg, at ACM undergrad chapter: 6 p.m., Wed., Feb. 25, 104 WVG) (pizza included)
NEWS:
One VLSI fabrication facility: $6.2 billion as of 2014
(from digitimes.com):
UMC to build 12-inch fab in Xiamen
NEWS:
Intel Announces Knights Mill: A Xeon Phi For Deep Learning
(see also Coral supercomputers, below)
Deep Learning on NVIDIA GPUs
DeepMind Beats Human Champion at Game of Go
(in 2015)
"[The
deep learning algorithm of] AlphaGo doesn't actually use that much
hardware in play, but we needed a lot of hardware to train it and do all
the different versions and have them play each other in tournaments on
the cloud. That takes quite a lot of hardware to do efficiently, so we
couldn't have done it in this time frame without those resources."
NEWS:
Coral supercomputers
(appearing from 2016--2018; see especially the table, lower down
in this article)
Relative Popularity of Different Languages
Benchmark Games (Which is faster, C, Java, or Python?):
(Benchmarks are notoriously variable. Be careful about how you interpret this.)
Three Newer Languages (with lessons from Scheme/Java/C/C++)
- Go (widely used at Google;
also the source language for
Docker,
a new type of lightweight virtual machine built on
top of Linux containers)
- Rust (grew out
of Mozilla, the developer of Firefox; may be used for a future
version of Firefox)
- Scala (runs on JVM;
Spark, a proposed successor to Hadoop, is built using Scala,
and supports Scala, Java, and Python)
GDB (GNU DeBugger):
A Few Simple Debugging Commands Save You Hours of Work
INVOKING gdb:
gdb --args
Example: gdb --args ./a.out
COMMON gdb COMMANDS:
break, continue
run
next, step, finish (next line, step inside fnc, finish current fnc)
where, frame, list (e.g.: where; frame 0; list)
info threads, thread (e.g.: thread 2)
ptype, print ( ptype argv[0]; print argv[0] )
quit
< Cursor keys work, TAB provides auto-complete >
set follow-fork-mode child (needed for debugging child process in shell)
IF PROGRAM IS IN INFINITE LOOP, TYPE ^C (ctrl-C) TO TALK TO gdb.
help e.g.: (gdb) help continue
NOTE: For those who like a
full-screen display of the current code, try the command ^Xa (ctrl-X a)
to turn full-screen mode on and off.
There are some good introductory materials for Python in
the instructor's directory.
After trying those out, here are some other Python background
materials:
Python
The following note by Rob Landley
is a truly excellent summary of the most important points of
virtual memory as it's really used (not just the textbook theoretical
synopsis):